STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STK40Serine/threonine-protein kinase 40 isoform 2. (435 aa)    
Predicted Functional Partners:
COP1
E3 ubiquitin-protein ligase RFWD2 isoform a.
    
 
 0.706
KPNA6
Importin subunit alpha; Functions in nuclear protein import.
   
  
 0.680
I3LA07_PIG
Uncharacterized protein.
      
 0.655
DNAJB4
DnaJ heat shock protein family (Hsp40) member B4.
   
 
 0.655
TTC28
Tetratricopeptide repeat domain 28.
    
 
 0.650
YARS1
Tyrosine--tRNA ligase.
      
 0.649
USP33
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 
 0.647
TRIB1
Tribbles pseudokinase 1.
    
 
0.619
TRIB3
Tribbles pseudokinase 3.
    
 
0.601
ETV1
ETS translocation variant 1 isoform X1.
   
   0.581
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.