STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALHM5Calcium homeostasis modulator family member 5. (312 aa)    
Predicted Functional Partners:
NT5DC1
5'-nucleotidase domain containing 1.
      
 0.852
IBTK
Inhibitor of Bruton tyrosine kinase.
      
 0.727
RCN2
Reticulocalbin 2.
      
 0.661
TRIB2
Tribbles pseudokinase 2.
      
 0.560
LOC100518318
Uncharacterized protein.
   
    0.533
C1orf109
Chromosome 1 open reading frame 109.
   
    0.524
GPRC6A
G protein-coupled receptor class C group 6 member A.
      
 0.467
PIGU
Phosphatidylinositol glycan anchor biosynthesis class U.
      
 0.451
BTK
Tyrosine-protein kinase.
   
  
 0.432
ARHGAP15
Rho GTPase activating protein 15.
      
 0.418
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.