STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNRC18Trinucleotide repeat containing 18. (2426 aa)    
Predicted Functional Partners:
OSBPL6
Oxysterol-binding protein; Belongs to the OSBP family.
    
 
 0.871
GALNT18
Polypeptide N-acetylgalactosaminyltransferase.
   
  
 0.853
DNPEP
Aspartyl aminopeptidase.
    
 
 0.852
NCAPH2
Uncharacterized protein.
      
 0.800
SEZ6L
Seizure related 6 homolog like.
    
 
 0.699
NBEA
Neurobeachin.
      
 0.690
SINHCAF
SIN3-HDAC complex associated factor.
    
 
 0.642
SIN3A
SIN3 transcription regulator family member A.
   
 
 0.616
SIN3B
Paired amphipathic helix protein Sin3b isoform X1.
   
 
 0.604
FGFR3
Fibroblast growth factor receptor.
   
    0.601
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.