STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF792Zinc finger protein 792. (611 aa)    
Predicted Functional Partners:
RPP38
Ribonuclease P/MRP subunit p38.
    
 
 0.545
TRIM28
Tripartite motif containing 28.
   
  0.517
LRIF1
Ligand-dependent nuclear receptor-interacting factor 1 isoform X1.
      
 0.504
KAZN
Kazrin, periplakin interacting protein.
      
 0.470
LSM11
LSM11, U7 small nuclear RNA associated.
      
 0.465
SH3TC2
SH3 domain and tetratricopeptide repeats 2.
      
 0.463
MAST4
Microtubule associated serine/threonine kinase family member 4.
      
 0.457
CDCA4
Cell division cycle associated 4.
      
 0.451
NABP1
Uncharacterized protein.
      
 0.448
WDCP
WD repeat and coiled coil containing.
      
 0.403
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.