STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECRG4ECRG4 augurin precursor. (147 aa)    
Predicted Functional Partners:
FIGN
Fidgetin, microtubule severing factor; Belongs to the AAA ATPase family.
      
 0.637
COL8A1
Collagen type VIII alpha 1 chain.
   
  
 0.600
SERPINF1
Serpin family F member 1; Belongs to the serpin family.
      
 0.516
CPNE6
Copine 6.
      
 0.506
CPNE4
Copine-4 isoform 1.
      
 0.506
A0A287B9Q7_PIG
Copine domain-containing protein.
      
 0.506
SCARF1
Scavenger receptor class F member 1 isoform 1.
      
 0.485
MFAP5
Microfibril associated protein 5.
  
   
 0.400
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.