STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SASH1SAM and SH3 domain containing 1. (1240 aa)    
Predicted Functional Partners:
SAMD5
Sterile alpha motif domain containing 5.
 
    
 0.907
GCSAML
Germinal center associated signaling and motility like.
      
 0.651
ERCC2
General transcription and DNA repair factor IIH helicase subunit XPD isoform 1.
      
 0.611
LDLRAD4
Low density lipoprotein receptor class A domain containing 4.
      
 0.611
LRATD1
LRAT domain containing 1.
      
 0.610
RPL26L1
60S ribosomal protein L26-like 1 isoform X1.
      
 0.605
ATP8A2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.602
IRF6
Interferon regulatory factor 6.
  
 
 
 0.578
SAMD12
Sterile alpha motif domain containing 12.
      
 0.573
GALNTL6
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.570
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.