STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC106Coiled-coil domain containing 106. (281 aa)    
Predicted Functional Partners:
CCDC154
Coiled-coil domain containing 154.
      
 0.823
CCDC34
Coiled-coil domain containing 34.
      
 0.673
SNX15
Sorting nexin 15.
      
 0.655
RSPRY1
RING finger and SPRY domain-containing protein 1 isoform 1.
      
 0.654
TMEM63C
Transmembrane protein 63C.
      
 0.649
RCBTB1
RCC1 and BTB domain containing protein 1.
      
 0.649
IP6K2
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.646
NUDT13
Nudix hydrolase 13.
      
 0.636
TPRA1
Transmembrane protein adipocyte associated 1.
      
 0.617
RNF150
Ring finger protein 150.
      
 0.590
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.