STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AVPI1Arginine vasopressin-induced protein 1 isoform X1. (148 aa)    
Predicted Functional Partners:
CACNG7
Voltage-dependent calcium channel gamma-7 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization. Shows specificity only for GRIA1 and GRIA2. Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily.
      
 0.774
DDX17
DEAD-box helicase 17; Belongs to the DEAD box helicase family.
      
 0.722
KPNA1
IBB domain-containing protein.
      
 0.575
NCKIPSD
NCK interacting protein with SH3 domain.
      
 0.571
ALKBH7
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial.
      
 0.571
SAMD10
Sterile alpha motif domain containing 10.
      
 0.571
TRIM16
Uncharacterized protein.
      
 0.571
LOC100522551
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.535
SERPINI1
Serpin family I member 1; Belongs to the serpin family.
      
 0.516
CRISPLD2
Cysteine rich secretory protein LCCL domain containing 2.
      
 0.515
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.