STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERINC3Serine incorporator 3. (474 aa)    
Predicted Functional Partners:
PMS2
PMS1 homolog 2, mismatch repair system component.
 
      0.813
RUSC2
RUN and SH3 domain containing 2.
      
 0.791
APOBEC3B
Uncharacterized protein.
      
 0.711
SAMHD1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1.
   
  
 0.706
DAGLB
Diacylglycerol lipase beta.
      
 0.652
ATG9A
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
      
 0.646
AP4E1
Adaptor related protein complex 4 subunit epsilon 1.
      
 0.645
AP4B1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
      
 0.611
TMED3
Transmembrane p24 trafficking protein 3.
   
  
 0.607
IBTK
Inhibitor of Bruton tyrosine kinase.
      
 0.603
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.