STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRTAMCytotoxic and regulatory T cell molecule. (400 aa)    
Predicted Functional Partners:
NECTIN2
Uncharacterized protein.
     
 0.904
CADM1
Cell adhesion molecule 1.
    
 
0.891
HEATR9
HEAT repeat containing 9.
      
 0.799
SERGEF
Secretion regulating guanine nucleotide exchange factor.
      
 0.757
SLFN11
Schlafen family member 11.
      
 0.602
PIBF1
Progesterone immunomodulatory binding factor 1.
      
 0.589
GRIN2C
Glutamate ionotropic receptor NMDA type subunit 2C.
      
 0.572
STK32B
Serine/threonine kinase 32B; Belongs to the protein kinase superfamily.
      
 0.524
LY9
Lymphocyte antigen 9.
      
 0.510
RAB20
RAB20, member RAS oncogene family.
      
 0.510
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.