STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTR1AActin related protein 1A. (369 aa)    
Predicted Functional Partners:
DCTN2
Dynactin subunit 2.
   
 0.946
DCTN1
CAP-Gly domain-containing protein.
   
 0.918
DCTN4
Dynactin subunit 4.
   
 0.901
DYNC1I2
WD_REPEATS_REGION domain-containing protein.
    
 0.901
ACTR10
Actin-related protein 10; Belongs to the actin family.
   
0.886
BICDL1
BICD family-like cargo adapter 1 isoform X2.
    
 
 0.883
DCTN3
Dynactin subunit 3 isoform 1.
    
 0.881
DCTN6
Dynactin 6.
    
 0.866
DYNLL1
Dynein light chain.
   
 0.863
DCTN5
Dynactin subunit 5.
 
 
 0.843
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.