STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP1BLa ribonucleoprotein domain family member 1B. (1116 aa)    
Predicted Functional Partners:
PACC1
Proton activated chloride channel 1.
      
 0.757
SYNDIG1L
Synapse differentiation inducing 1 like.
      
 0.756
NENF
Neudesin neurotrophic factor; Belongs to the cytochrome b5 family.
   
 
 0.751
AKAP17B
RRM domain-containing protein.
      
 0.739
GTF2A1
General transcription factor IIA subunit 1.
      
 0.733
CYB5D2
Cytochrome b5 domain containing 2; Belongs to the cytochrome b5 family.
      
 0.732
KIAA1210
Uncharacterized protein.
      
 0.730
PGRMC2
Uncharacterized protein.
   
 
 0.697
LIN52
Lin-52 DREAM MuvB core complex component.
      
 0.638
RRP12
Ribosomal RNA processing 12 homolog.
   
  
 0.626
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.