STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZKSCAN1Zinc finger with KRAB and SCAN domains 1. (563 aa)    
Predicted Functional Partners:
CLNS1A
Chloride nucleotide-sensitive channel 1A.
      
 0.730
ESYT2
Extended synaptotagmin 2.
      
 0.729
FAM120A
Constitutive coactivator of PPAR-gamma-like protein 1 isoform b.
      
 0.684
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
      
 0.683
FBXW4
F-box and WD repeat domain containing 4.
      
 0.670
NUP54
Nucleoporin 54.
   
 
 0.643
MANBA
Mannosidase beta.
      
 0.615
ECPAS
Ecm29 proteasome adaptor and scaffold.
      
 0.602
TRIM28
Tripartite motif containing 28.
   
 0.547
NELFE
Negative elongation factor complex member E.
    
 
 0.476
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.