STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXL13F-box and leucine rich repeat protein 13. (737 aa)    
Predicted Functional Partners:
TSPAN10
Tetraspanin.
   
    0.790
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.749
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.745
SH3KBP1
SH3 domain containing kinase binding protein 1.
    
 
 0.675
TRIP6
Thyroid hormone receptor interactor 6.
      
 0.652
FAM185A
Family with sequence similarity 185 member A.
      
 0.645
CRY2
Cryptochrome circadian regulator 2.
    
 
 0.636
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.611
NOL4
Nucleolar protein 4.
   
  
 0.604
A0A287AGI9_PIG
Skp1 domain-containing protein.
   
 
 0.599
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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