STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100513346Coronin; Belongs to the WD repeat coronin family. (962 aa)    
Predicted Functional Partners:
KLHL20
Kelch like family member 20.
    
 
 0.870
PAM16
Presequence translocase associated motor 16.
 
    
 0.854
RNF166
Ring finger protein 166.
   
  
 0.769
KLHL28
Kelch like family member 28.
    
 
 0.690
EPS15
Epidermal growth factor receptor pathway substrate 15.
    
 
 0.564
KBTBD8
Kelch repeat and BTB domain-containing protein 8 isoform X1.
    
 
 0.541
UBE2W
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.527
LRSAM1
Leucine rich repeat and sterile alpha motif containing 1.
      
 0.515
UBD
Uncharacterized protein.
      
 0.510
TRIM13
E3 ubiquitin-protein ligase TRIM13 isoform 2.
   
  
 0.501
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.