STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAG4Sperm associated antigen 4. (440 aa)    
Predicted Functional Partners:
MRPS18A
Mitochondrial ribosomal protein S18A.
      
 0.901
TOR3A
Torsin family 3 member A.
   
  
 0.853
STK38L
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
  
 0.786
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 
 0.771
RFT1
Protein RFT1 homolog; May be involved in N-linked oligosaccharide assembly. Belongs to the RFT1 family.
      
 0.762
RBPMS
RNA binding protein, mRNA processing factor.
      
 0.688
ODF1
Outer dense fiber protein 1; Component of the outer dense fibers (ODF) of spermatozoa. ODF are filamentous structures located on the outside of the axoneme in the midpiece and principal piece of the mammalian sperm tail and may help to maintain the passive elastic structures and elastic recoil of the sperm tail.
   
 
 0.687
PXMP4
Uncharacterized protein.
      
 0.647
ZNF341
Zinc finger protein 341.
    
 
 0.617
SNAP23
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
      
 0.609
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.