STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF311Zinc finger protein 311. (667 aa)    
Predicted Functional Partners:
DHX16
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; Required for pre-mRNA splicing as component of the spliceosome. Contributes to pre-mRNA splicing after spliceosome formation and prior to the first transesterification reaction. Belongs to the DEAD box helicase family. DEAH subfamily. DDX16/PRP8 sub-subfamily.
    
 
 0.533
DDX10
RNA helicase.
   
 
 0.519
TRIM28
Tripartite motif containing 28.
   
  0.517
DDX18
RNA helicase.
   
 
 0.513
DDX55
RNA helicase.
   
 
 0.512
CRLF3
Cytokine receptor like factor 3.
      
 0.506
TAL2
TAL bHLH transcription factor 2.
   
 
 0.506
CNOT11
CCR4-NOT transcription complex subunit 11.
      
 0.497
THTPA
Thiamine-triphosphatase; Hydrolase highly specific for thiamine triphosphate (ThTP).
    
 
 0.496
DCAF12L2
DDB1 and CUL4 associated factor 12 like 2.
      
 0.491
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (24%) [HD]