STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PEX1Peroxisomal biogenesis factor 1. (1277 aa)    
Predicted Functional Partners:
PEX6
Peroxisomal biogenesis factor 6.
  
 
0.977
UBXN7
UBX domain-containing protein.
   
 
 0.830
PEX5
Peroxisomal biogenesis factor 5.
   
 
 0.762
PEX13
Peroxisomal biogenesis factor 13.
    
 
 0.754
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 
 0.722
PEX14
Peroxisomal biogenesis factor 14.
    
 
 0.705
PEX10
Pex2_Pex12 domain-containing protein.
   
 
 0.698
SGSM2
Small G protein signaling modulator 2.
      
 0.678
PEX5L
Peroxisomal biogenesis factor 5 like.
   
 
 0.650
PEX19
Uncharacterized protein.
    
 
 0.604
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.