STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM126ATransmembrane protein 126A isoform 1. (196 aa)    
Predicted Functional Partners:
RTN4IP1
Reticulon 4 interacting protein 1.
   
  
 0.880
TMEM109
Transmembrane protein 109.
      
 0.822
SSBP1
Single stranded DNA binding protein 1.
   
 
 0.790
TMEM41A
Transmembrane protein 41A.
      
 0.741
SEC11C
Signal peptidase complex catalytic subunit SEC11.
   
  
 0.735
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.727
NDUFAF4
NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor 4.
   
  
 0.717
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
   
  
 0.707
FOXRED1
FAD dependent oxidoreductase domain containing 1.
      
 0.685
NFS1
Cysteine desulfurase, mitochondrial.
   
  
 0.662
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.