STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXLNBTaxilin beta. (676 aa)    
Predicted Functional Partners:
TMEM236
Transmembrane protein 236.
      
 0.846
PRPF6
Pre-mRNA processing factor 6.
      
 0.803
CCDC158
Coiled-coil domain-containing protein 158 isoform X1.
    
 
 0.799
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
      
 0.773
NCLN
Nicalin.
   
  
 0.692
CYP4F3
Cytochrome P450 family 4 subfamily F member 3; Belongs to the cytochrome P450 family.
      
 0.664
TBC1D12
TBC1 domain family member 12.
      
 0.664
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.660
CDHR3
Cadherin related family member 3.
      
 0.657
RNF122
Ring finger protein 122.
      
 0.654
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.