STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A287A9Q1_PIGUncharacterized protein. (136 aa)    
Predicted Functional Partners:
WASHC1
WH2 domain-containing protein.
    
 0.925
WASHC5
WASH complex subunit 5 isoform X1.
    
 0.876
WASHC4
WASH complex subunit 4.
    
 0.823
LOC100522401
CAP-ZIP_m domain-containing protein.
    
 0.811
CAPZB
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization (By similarity).
    
 0.668
SNX27
Sorting nexin 27.
    
 0.662
HSBP1
Uncharacterized protein.
    
 
 0.654
HSBP1L1
Uncharacterized protein.
    
 
 0.653
KLHL42
Kelch like family member 42.
      
 0.558
WASHC3
WASH complex subunit 3.
  
  
 
0.549
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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