STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC2Zinc finger CCHC domain-containing protein 2. (1177 aa)    
Predicted Functional Partners:
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 
 0.802
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
  
 0.700
ZNF518A
Zinc finger protein 518A isoform a.
    
 
 0.598
PHLPP1
PH domain and leucine rich repeat protein phosphatase 1.
   
  
 0.567
FAM117B
Family with sequence similarity 117 member B.
      
 0.554
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
   
 
 0.538
DCC
DCC netrin 1 receptor.
      
 0.517
DENR
Density-regulated protein; Belongs to the DENR family.
   
 
 0.516
ADGRE5
Adhesion G protein-coupled receptor E5; Belongs to the G-protein coupled receptor 2 family.
      
 0.510
TNFRSF11A
TNF receptor superfamily member 11a.
      
 0.510
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.