STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1MPPM-type phosphatase domain-containing protein. (535 aa)    
Predicted Functional Partners:
RAB29
RAB29, member RAS oncogene family.
    
 
 0.589
PPP3CA
Serine/threonine-protein phosphatase.
      
 0.542
RAB7A
RAB7A, member RAS oncogene family.
    
 
 0.536
PTPRU
Protein tyrosine phosphatase receptor type U.
   
  
 0.519
PLPP6
Phospholipid phosphatase 6.
      
 0.518
NT5DC2
5'-nucleotidase domain containing 2.
      
 0.518
MTMR9
Myotubularin related protein 9.
      
 0.518
RAB8A
Uncharacterized protein.
    
 
 0.517
RAB8B
RAB8B, member RAS oncogene family.
    
 
 0.517
PPEF2
Serine/threonine-protein phosphatase with EF-hands.
      
 0.504
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.