STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAM2Translocation associated membrane protein 2. (392 aa)    
Predicted Functional Partners:
TMEM170B
Transmembrane protein 170B.
      
 0.700
TMX1
Thioredoxin-related transmembrane protein 1.
   
  
 0.673
CCDC80
Coiled-coil domain containing 80.
   
  
 0.656
ANXA10
Annexin A10.
      
 0.631
SEC63
SEC63 homolog, protein translocation regulator.
   
 
 0.610
AGAP1
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1.
      
 0.610
EMSY
EMSY transcriptional repressor, BRCA2 interacting.
      
 0.607
LAX1
Lymphocyte transmembrane adaptor 1.
      
 0.574
MT1D
Metallothionein-1C; Metallothioneins have a high content of cysteine residues that bind various heavy metals; these proteins are transcriptionally regulated by both heavy metals and glucocorticoids.
      
 0.555
UTRN
Uncharacterized protein.
      
 0.550
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.