STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM44RNA binding motif protein 44. (1056 aa)    
Predicted Functional Partners:
TNFAIP8L2
Tumor necrosis factor alpha-induced protein 8-like 2.
      
 0.708
GDI1
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
      
 0.698
MBD6
Methyl-CpG binding domain protein 6.
      
 0.621
TSN
Translin isoform X1.
      
 0.576
ASMTL
Acetylserotonin O-methyltransferase like.
      
 0.572
TOM1
Target of myb1 membrane trafficking protein; Belongs to the TOM1 family.
   
  
 0.558
HSF2
Heat shock factor protein 2 isoform a.
      
 0.552
FAM181A
Family with sequence similarity 181 member A.
      
 0.536
ACTL9
Actin like 9; Belongs to the actin family.
   
  
 0.519
LOC100154312
Uncharacterized protein.
      
 0.514
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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