STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ILRUNN_BRCA1_IG domain-containing protein. (217 aa)    
Predicted Functional Partners:
SRPK1
SRSF protein kinase 1.
   
  
 0.618
KIFC1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.613
RPS20
40S ribosomal protein S20.
      
 0.609
SPDEF
SAM pointed domain containing ETS transcription factor.
 
    
 0.605
RIPOR2
PL48 domain-containing protein.
      
 0.604
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.570
DPH6
Diphthamine biosynthesis 6.
      
 0.566
EIF2S3
Eukaryotic translation initiation factor 2 subunit 3.
      
 0.546
UHRF1BP1
UHRF1 binding protein 1.
      
 0.546
PARP4
Poly [ADP-ribose] polymerase.
      
 0.515
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.