STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YPEL2Protein yippee-like; Belongs to the yippee family. (119 aa)    
Predicted Functional Partners:
WDR26
WD repeat domain 26.
   
 
 0.584
PPM1F
Protein phosphatase, Mg2+/Mn2+ dependent 1F.
    
 
 0.520
ARMC8
Armadillo repeat containing 8.
    
 
 0.500
C17orf64
Chromosome 17 open reading frame 64.
   
  
 0.483
DHX40
Putative ATP-dependent RNA helicase DHX40 isoform X1.
      
 0.476
PTRH2
Peptidyl-tRNA hydrolase 2, mitochondrial isoform X1.
      
 0.470
HEATR6
HEAT repeat containing 6.
      
 0.469
RANBP9
RAN binding protein 9.
   
 
 0.462
RANBP10
RAN binding protein 10.
   
 
 0.462
KCTD20
Potassium channel tetramerization domain containing 20.
   
  
 0.457
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.