STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD6Ankyrin repeat domain-containing protein 6 isoform X2. (727 aa)    
Predicted Functional Partners:
PM20D2
Peptidase M20 domain containing 2.
   
  
 0.688
PRICKLE3
Prickle planar cell polarity protein 3.
   
 
 0.677
MDN1
Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family.
   
 
 0.639
CCNJL
Cyclin J like; Belongs to the cyclin family.
      
 0.611
REPS2
RalBP1-associated Eps domain-containing protein 2 isoform 1.
   
 
 0.563
CELSR1
Cadherin EGF LAG seven-pass G-type receptor 1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.558
VANGL1
Vang-like protein.
    
 
 0.552
STK4
Serine/threonine kinase 4.
      
 0.531
CELSR2
Cadherin EGF LAG seven-pass G-type receptor 2; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.529
PRICKLE1
Prickle planar cell polarity protein 1.
   
 
 0.526
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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