STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM60Transmembrane protein 60. (133 aa)    
Predicted Functional Partners:
TMEM120A
Transmembrane protein 120A isoform 1.
      
 0.897
TMEM120B
Transmembrane protein 120B.
      
 0.780
ANKFN1
Ankyrin repeat and fibronectin type III domain containing 1.
      
 0.680
TMEM236
Transmembrane protein 236.
      
 0.670
TMEM26
Transmembrane protein 26.
      
 0.610
C11orf74
Chromosome 11 open reading frame 74.
      
 0.602
CASC3
CASC3 exon junction complex subunit.
      
 0.546
ZNF518B
Zinc finger protein 518B isoform X1.
      
 0.543
DPYD
Dihydropyrimidine dehydrogenase [NADP(+)]; Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine; Belongs to the dihydropyrimidine dehydrogenase family.
      
 0.539
DENND2A
DENN domain containing 2A.
      
 0.530
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.