STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NID2Nidogen 2. (1348 aa)    
Predicted Functional Partners:
LAMC1
Uncharacterized protein.
   
 
 0.815
HSPG2
Heparan sulfate proteoglycan 2.
   
 
 0.794
LAMC3
Laminin subunit gamma 3.
   
 
 0.763
LAMA4
Laminin subunit alpha 4.
   
 0.710
LAMB1
Laminin subunit beta 1.
   
 
 0.705
LAMA3
Laminin subunit alpha 3.
   
 0.688
COL4A2
Collagen type IV alpha 2 chain.
   
 
 0.634
LAMC2
Laminin subunit gamma-2 isoform a.
   
 
 0.634
RBAK
RB associated KRAB zinc finger.
    
 
 0.617
FBLN2
Fibulin-2 isoform a.
   
 
0.613
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.