STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNPEPAminopeptidase B isoform a. (648 aa)    
Predicted Functional Partners:
MORN3
MORN repeat-containing protein 3 isoform X1.
      
 0.830
ATP23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
   
  
 0.674
PREP
Prolyl endopeptidase; Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long.
     
 0.631
SH2D4B
SH2 domain-containing protein 4B isoform X1.
      
 0.597
MIPEP
Mitochondrial intermediate peptidase.
    
 
 0.590
PDE5A
Phosphodiesterase.
      
 0.583
TRIT1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
 
      0.565
HIBADH
3-hydroxyisobutyrate dehydrogenase.
      
 0.561
FARP1
FERM, ARH/RhoGEF and pleckstrin domain protein 1.
      
 0.541
DHRS7C
Dehydrogenase/reductase 7C; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 
 0.530
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.