STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REEP4Receptor expression-enhancing protein. (257 aa)    
Predicted Functional Partners:
ATL1
Atlastin GTPase 1.
   
 
 0.730
NEMP1
Nuclear envelope integral membrane protein 1 isoform a.
   
  
 0.670
RIBC2
RIB43A-like with coiled-coils protein 2.
   
 
 0.669
CCDC34
Coiled-coil domain containing 34.
   
  
 0.661
ATL3
Atlastin GTPase 3.
   
 
 0.658
GSTCD
Glutathione S-transferase C-terminal domain containing.
      
 0.648
CEP85
Centrosomal protein 85.
      
 0.648
CCDC77
Coiled-coil domain-containing protein 77 isoform a.
      
 0.645
FIGNL1
Fidgetin-like protein 1 isoform 1; Belongs to the AAA ATPase family.
   
  
 0.594
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
   
  
 0.574
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.