STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC69Coiled-coil domain containing 69. (331 aa)    
Predicted Functional Partners:
ARMCX2
Armadillo repeat containing X-linked 2.
      
 0.835
EIF4A1
Eukaryotic translation initiation factor 4A isoform 1; Belongs to the DEAD box helicase family.
      
 0.570
PERP
Uncharacterized protein.
      
 0.570
YJU2
YJU2 splicing factor homolog.
      
 0.553
RAPGEF3
Rap guanine nucleotide exchange factor 3 isoform a.
      
 0.516
ELMOD3
ELMO domain containing 3.
      
 0.516
ZNF623
Zinc finger protein 623.
      
 0.516
TP53I13
Tumor protein p53 inducible protein 13.
      
 0.516
ARHGAP39
Rho GTPase activating protein 39.
      
 0.514
CD300LG
IG domain-containing protein.
      
 0.514
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.