STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41L3Erythrocyte membrane protein band 4.1 like 3. (1213 aa)    
Predicted Functional Partners:
CADM1
Cell adhesion molecule 1.
    
 
 0.867
ASCC1
Activating signal cointegrator 1 complex subunit 1.
      
 0.684
NCLN
Nicalin.
      
 0.670
IQCJ
IQ motif containing J.
      
 0.664
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.657
EPB41L2
Erythrocyte membrane protein band 4.1 like 2.
    
 
0.647
EPB41
Erythrocyte membrane protein band 4.1.
    
0.588
EPB41L1
FERM domain-containing protein.
    
 
0.577
AATF
Apoptosis antagonizing transcription factor.
      
 0.554
NLGN1
Neuroligin 1.
    
 0.551
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.