GATAD2B protein (Sus scrofa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

GATAD2B

GATA zinc finger domain containing 2B. (620 aa)

Predicted Functional Partners:

MTA2

0.948

MTA3

0.942

MTA1

0.936

CHD4

0.931

CHD3

0.923

RBBP7

0.900

HDAC1

0.898

MBD3

0.884

HDAC2

0.873

GATAD2A

0.826

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHD3	CHD4	ENSSSCP00000055609	ENSSSCP00000040831	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	Uncharacterized protein.	0.870
CHD3	GATAD2A	ENSSSCP00000055609	ENSSSCP00000071411	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	GATA zinc finger domain containing 2A.	0.944
CHD3	GATAD2B	ENSSSCP00000055609	ENSSSCP00000046124	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	GATA zinc finger domain containing 2B.	0.923
CHD3	HDAC1	ENSSSCP00000055609	ENSSSCP00000021778	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.954
CHD3	HDAC2	ENSSSCP00000055609	ENSSSCP00000004781	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.937
CHD3	MBD3	ENSSSCP00000055609	ENSSSCP00000014284	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	Methyl-CpG binding domain protein 3.	0.847
CHD3	MTA1	ENSSSCP00000055609	ENSSSCP00000063420	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	Metastasis associated 1.	0.898
CHD3	MTA2	ENSSSCP00000055609	ENSSSCP00000013892	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	Metastasis associated 1 family member 2.	0.896
CHD3	MTA3	ENSSSCP00000055609	ENSSSCP00000027521	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	Metastasis associated 1 family member 3.	0.870
CHD3	RBBP7	ENSSSCP00000055609	ENSSSCP00000074372	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	RB binding protein 7, chromatin remodeling factor.	0.894
CHD4	CHD3	ENSSSCP00000040831	ENSSSCP00000055609	Uncharacterized protein.	Chromodomain-helicase-DNA-binding protein 3 isoform X1.	0.870
CHD4	GATAD2A	ENSSSCP00000040831	ENSSSCP00000071411	Uncharacterized protein.	GATA zinc finger domain containing 2A.	0.943
CHD4	GATAD2B	ENSSSCP00000040831	ENSSSCP00000046124	Uncharacterized protein.	GATA zinc finger domain containing 2B.	0.931
CHD4	HDAC1	ENSSSCP00000040831	ENSSSCP00000021778	Uncharacterized protein.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.991
CHD4	HDAC2	ENSSSCP00000040831	ENSSSCP00000004781	Uncharacterized protein.	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.989
CHD4	MBD3	ENSSSCP00000040831	ENSSSCP00000014284	Uncharacterized protein.	Methyl-CpG binding domain protein 3.	0.881
CHD4	MTA1	ENSSSCP00000040831	ENSSSCP00000063420	Uncharacterized protein.	Metastasis associated 1.	0.924
CHD4	MTA2	ENSSSCP00000040831	ENSSSCP00000013892	Uncharacterized protein.	Metastasis associated 1 family member 2.	0.943
CHD4	MTA3	ENSSSCP00000040831	ENSSSCP00000027521	Uncharacterized protein.	Metastasis associated 1 family member 3.	0.886
CHD4	RBBP7	ENSSSCP00000040831	ENSSSCP00000074372	Uncharacterized protein.	RB binding protein 7, chromatin remodeling factor.	0.889