STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC29Tetratricopeptide repeat protein 29 isoform 1. (467 aa)    
Predicted Functional Partners:
DNAH1
Dynein axonemal heavy chain 1.
   
  
 0.825
CCDC40
Coiled-coil domain containing 40.
   
 
 0.815
SOGA1
Suppressor of glucose, autophagy associated 1.
      
 0.774
GPR155
G protein-coupled receptor 155.
      
 0.724
KCTD16
Potassium channel tetramerization domain containing 16.
      
 0.699
DLGAP1
Disks large-associated protein 1 isoform X1.
   
  
 0.672
ADGRB1
Adhesion G protein-coupled receptor B1; Belongs to the G-protein coupled receptor 2 family.
      
 0.669
CEP135
Centrosomal protein of 135 kDa.
      
 0.656
PITRM1
Pitrilysin metallopeptidase 1.
   
  
 0.656
CFAP43
Cilia and flagella associated protein 43.
   
  
 0.622
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.