STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADGRV1Adhesion G protein-coupled receptor V1. (6313 aa)    
Predicted Functional Partners:
PDZD7
Uncharacterized protein.
    
 
 0.857
USH1G
USH1 protein network component sans.
    
 
 0.833
WHRN
Whirlin.
    
 
 0.829
PCDH15
Uncharacterized protein.
      
 0.809
CDH23
Cadherin related 23.
      
 0.804
CIB2
Calcium and integrin binding family member 2.
      
 0.708
USH1C
USH1 protein network component harmonin.
    
 
 0.703
GRXCR1
Glutaredoxin and cysteine rich domain containing 1.
   
  
 0.700
HNMT
Histamine N-methyltransferase isoform 1.
      
 0.640
USH2A
Uncharacterized protein.
  
   
0.631
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.