STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB7EF-hand calcium binding domain 7. (662 aa)    
Predicted Functional Partners:
IQCE
IQ motif containing E.
   
 0.990
EVC2
EvC ciliary complex subunit 2.
     
 0.941
ST13
ST13 Hsp70 interacting protein.
      
 0.814
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
      
 0.706
GP9
Glycoprotein IX platelet.
    
 
 0.698
DLG5
Discs large MAGUK scaffold protein 5; Belongs to the MAGUK family.
    
 
 0.688
TTC23
Tetratricopeptide repeat domain 23.
    
 
 0.615
EVC
Ellis-van Creveld syndrome protein isoform 2.
    
 0.598
SAA4
Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex.
      
 0.587
SPA17
Sperm surface protein Sp17; Sperm surface zona pellucida binding protein. Helps to bind spermatozoa to the zona pellucida with high affinity. Might function in binding zona pellucida and carbohydrates.
    
   0.567
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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