STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPXSmall muscular protein; Plays a role in the regulatory network through which muscle cells coordinate their structural and functional states during growth, adaptation, and repair. (88 aa)    
Predicted Functional Partners:
MYOZ2
Calsarcin 1.
   
  
 0.776
PDLIM3
PDZ and LIM domain protein 3; May play a role in the organization of actin filament arrays within muscle cells.
   
  
 0.675
MYH7B
Myosin heavy chain 7B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.666
CSRP3
Uncharacterized protein.
   
  
 0.659
TECTB
Tectorin beta.
      
 0.646
PRPS1
Uncharacterized protein.
      
 0.631
ITGB1BP2
Integrin beta-1-binding protein 2; May play a role during maturation and/or organization of muscles cells.
   
  
 0.631
MYL1
Uncharacterized protein.
   
  
 0.604
TECTA
Tectorin alpha.
   
  
 0.603
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
  
 0.603
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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