STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXNL1Nucleoredoxin like 1. (214 aa)    
Predicted Functional Partners:
FSCN2
Fascin actin-bundling protein 2, retinal.
      
 0.630
PRXL2A
Peroxiredoxin like 2A.
      
 0.617
DGKZ
Diacylglycerol kinase.
      
 0.611
PALM2AKAP2
AKAP2_C domain-containing protein.
      
 0.609
FAR2
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
      
 0.608
ATP8A2
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.600
ABCA4
ATP binding cassette subfamily A member 4.
   
  
 0.584
PDE6C
Phosphodiesterase.
   
  
 0.583
ATXN10
Ataxin 10.
      
 0.581
C8orf37
Chromosome 8 open reading frame 37.
      
 0.580
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.