STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYAP1Synapse-associated protein 1. (358 aa)    
Predicted Functional Partners:
DTX3L
Deltex E3 ubiquitin ligase 3L.
      
 0.762
ACOT9
Acyl-CoA thioesterase 9.
   
  
 0.735
LIG3
DNA ligase.
      
 0.663
EIF1AY
Eukaryotic translation initiation factor 1A Y-linked; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
   
  
 0.625
USP9X
Putative ubiquitin carboxyl-terminal hydrolase FAF-X isoform X4; Belongs to the peptidase C19 family.
      
 0.611
EIF2S3
Eukaryotic translation initiation factor 2 subunit 3.
   
  
 0.601
NOC4L
Nucleolar complex associated 4 homolog.
      
 0.575
A0A287BBY0_PIG
Uncharacterized protein.
   
  
 0.534
GNB1L
G protein subunit beta 1 like.
      
 0.517
IGBP1
Uncharacterized protein.
      
 0.508
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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