STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPIDRDNA repair-scaffolding protein isoform 1. (924 aa)    
Predicted Functional Partners:
SWSAP1
SWIM-type zinc finger 7 associated protein 1.
    
 
 0.722
FIGNL1
Fidgetin-like protein 1 isoform 1; Belongs to the AAA ATPase family.
    
 
 0.680
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.664
MRNIP
Uncharacterized protein.
      
 0.646
DCHS1
Dachsous cadherin-related 1.
      
 0.597
AMOTL1
Angiomotin-like protein 1 isoform X1.
      
 0.595
ERCC6L2
Uncharacterized protein.
      
 0.575
STRBP
Spermatid perinuclear RNA binding protein.
      
 0.572
MAN2A1
Alpha-mannosidase.
      
 0.571
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.570
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.