STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC117Coiled-coil domain containing 117. (279 aa)    
Predicted Functional Partners:
MEGF11
Multiple EGF like domains 11.
      
 0.834
VEPH1
Ventricular zone-expressed PH domain-containing protein homolog 1 isoform X2.
      
 0.816
SLC16A4
Monocarboxylate transporter 5 isoform 1.
      
 0.788
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
      
 0.774
GYPC
Uncharacterized protein.
      
 0.756
PTAFR
Platelet-activating factor receptor; Receptor for platelet activating factor, a chemotactic phospholipid mediator that possesses potent inflammatory, smooth-muscle contractile and hypotensive activity. Seems to mediate its action via a G protein that activates a phosphatidylinositol-calcium second messenger system. May have a role in peri-implantation development during pregnancy (By similarity); Belongs to the G-protein coupled receptor 1 family.
      
 0.744
CNTNAP5
Contactin associated protein like 5.
      
 0.713
ADGRL4
Adhesion G protein-coupled receptor L4; Belongs to the G-protein coupled receptor 2 family.
      
 0.678
MOSPD1
Motile sperm domain containing 1.
      
 0.667
EBPL
EBP like.
      
 0.664
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.