STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A23Solute carrier family 22 member 23. (687 aa)    
Predicted Functional Partners:
C7orf50
Chromosome 7 open reading frame 50.
      
 0.843
CFAP74
Cilia and flagella associated protein 74.
      
 0.826
DNAJC15
DnaJ heat shock protein family (Hsp40) member C15.
      
 0.764
EXOC1
Exocyst complex component 1.
      
 0.730
CLSTN3
Calsyntenin 3.
      
 0.726
IQGAP3
IQ motif containing GTPase activating protein 3.
   
  
 0.722
ECI2
Enoyl-CoA delta isomerase 2.
      
 0.705
RPAP3
RNA polymerase II associated protein 3.
    
 
 0.660
TRPC4
Transient receptor potential cation channel subfamily C member 4; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.651
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
  
 0.620
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.