STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGBL5ATP/GTP binding protein like 5. (871 aa)    
Predicted Functional Partners:
EVA1A
Eva-1 homolog A, regulator of programmed cell death.
      
 0.871
OSBPL6
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.832
GALNT13
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.678
GLIPR1
GLI pathogenesis related 1; Belongs to the CRISP family.
      
 0.659
B3GALNT2
Hexosyltransferase.
      
 0.653
YTHDC1
YTH domain containing 1.
      
 0.628
SPATA46
Spermatogenesis associated 46.
      
 0.626
ARMC2
Armadillo repeat containing 2.
    
 
 0.584
TTLL11
Tubulin tyrosine ligase like 11.
      
 0.582
SFPQ
Splicing factor, proline-and glutamine-rich isoform X1.
      
 0.579
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.