STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTX4Pentraxin 4. (477 aa)    
Predicted Functional Partners:
RAB44
RAB44, member RAS oncogene family.
      
 0.873
VPS52
VPS52 subunit of GARP complex.
      
 0.779
TREML2
Triggering receptor expressed on myeloid cells like 2.
      
 0.772
FOXRED2
FAD-dependent oxidoreductase domain-containing protein 2.
   
  
 0.765
MEGF10
Uncharacterized protein.
   
  
 0.731
EPHX3
Epoxide hydrolase 3.
      
 0.728
GTPBP1
GTP binding protein 1.
      
 0.611
TNXB
Uncharacterized protein.
   
  
 0.607
PLA2G7
Platelet-activating factor acetylhydrolase.
      
 0.598
CRP
C-reactive protein; Displays several functions associated with host defense: it promotes agglutination, bacterial capsular swelling, phagocytosis and complement fixation through its calcium-dependent binding to phosphorylcholine. Can interact with DNA and histones and may scavenge nuclear material released from damaged circulating cells (By similarity); Belongs to the pentraxin family.
   
 
0.553
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.