STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100737676Uncharacterized protein. (356 aa)    
Predicted Functional Partners:
CCDC15
Coiled-coil domain-containing protein 15.
      
 0.524
PPP1CB
Serine/threonine-protein phosphatase PP1-beta catalytic subunit; Protein phosphatase that associates with over 200 regulatory proteins to form highly specific holoenzymes which dephosphorylate hundreds of biological targets. Protein phosphatase (PP1) is essential for cell division, it participates in the regulation of glycogen metabolism, muscle contractility and protein synthesis. Involved in regulation of ionic conductances and long-term synaptic plasticity. Component of the PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progressi [...]
    
 
 0.516
CSMD2
Uncharacterized protein.
      
 0.508
CSMD1
CUB and Sushi multiple domains 1.
      
 0.508
MLLT6
MLLT6, PHD finger containing.
   
  
 0.505
DENND5B
DENN domain containing 5B.
   
  
 0.478
SPOCK3
SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3.
      
 0.473
FSTL4
Follistatin like 4.
      
 0.472
ZBTB1
Zinc finger and BTB domain-containing protein 1 isoform X1.
      
 0.472
GNAZ
Guanine nucleotide-binding protein G(Z) subunit alpha isoform X1.
      
 0.471
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.