STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTNAP2F5/8 type C domain-containing protein. (136 aa)    
Predicted Functional Partners:
CNTN2
Contactin 2.
   
 0.929
A0A287B522_PIG
4.1m domain-containing protein.
 
      0.900
NRXN3
Neurexin 3.
   
  
 0.635
LRRTM1
Leucine-rich repeat transmembrane neuronal protein 1 isoform X1.
   
  
 0.621
CNTN5
Contactin 5.
   
 
 0.599
DOLK
Dolichol kinase.
      
 0.581
SLITRK1
SLIT and NTRK-like protein 1.
   
  
 0.571
PNPLA8
Calcium-independent phospholipase A2-gamma isoform 1.
      
 0.546
MYO1G
Myosin IG; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.520
NLGN3
Neuroligin-3 isoform 1.
   
 
 0.488
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.