STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNBPCCHC-type zinc finger nucleic acid binding protein. (167 aa)    
Predicted Functional Partners:
MBNL3
Muscleblind like splicing regulator 3.
   
 
 0.792
HNRNPK
Uncharacterized protein.
   
  
 0.743
MRM2
FtsJ domain-containing protein.
   
 
 0.707
MBNL2
Muscleblind like splicing regulator 2.
   
 
 0.686
LOC102161120
Uncharacterized protein.
   
  
 0.685
CISD3
CDGSH iron sulfur domain 3.
      
 0.678
UBXN8
UBX domain-containing protein 8 isoform 1.
      
 0.665
LYAR
Ly1 antibody reactive.
   
 
 0.593
SNRPG
Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing.
   
  
 0.582
RNF34
E3 ubiquitin-protein ligase RNF34 isoform 2.
   
  
 0.580
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.