STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNTN1Contactin 1. (1018 aa)    
Predicted Functional Partners:
NFASC
Neurofascin.
   
0.983
NRCAM
Neuronal cell adhesion molecule.
   
0.954
CNTNAP1
Contactin associated protein 1.
   
 0.952
PTPRZ1
Protein tyrosine phosphatase receptor type Z1.
   
 
 0.870
APP
Gamma-secretase C-terminal fragment 50; Functions as a cell surface receptor and performs physiological functions on the surface of neurons relevant to neurite growth, neuronal adhesion and axonogenesis. Interaction between APP molecules on neighboring cells promotes synaptogenesis. Involved in cell mobility and transcription regulation through protein-protein interactions (By similarity). Can promote transcription activation through binding to APBB1-KAT5 and inhibit Notch signaling through interaction with Numb (By similarity). Couples to apoptosis-inducing pathways such as those medi [...]
   
 
 0.644
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 
 0.638
A0A5G2RN71_PIG
Uncharacterized protein.
    
 
 0.610
GLDN
Gliomedin isoform 1.
      
 0.547
AP3B2
AP-3 complex subunit beta.
   
  
 0.534
APLP2
Amyloid beta precursor like protein 2.
   
 
 0.533
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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